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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933799.1_cds_XP_016479991.1_71473
CDS Infomation

[gene=LOC107801220] [db_xref=GeneID:107801220] [protein=fe-S cluster assembly factor HCF101, chloroplastic-like] [protein_id=XP_016479991.1] [location=complement(join(13233..13301,13880..14002,14217..14341,14590..14713,15035..15088,15462..15551,15681..15776,15896..15965,16435..16577,16647..16790,17090..17245,17685..17735,17815..17957,19081..19200,19282..19354))] [gbkey=CDS]
Sequence

ATGACACAGCTTCTTCAGGCTCCATCTTCTCCTACTCTCACATTTCATCACTGTACTTCA
CAACCCAAATCAGGATTATATGTAGCTGAGAAATCTTTTCTCCAGTCCACTCAAAGACAT
GTCAGGAGCTTGAATATTTCGTATACCTATTCAAGTTTGAGCTCATTTACAGCTAAAGCT
GCTTCAAATGGAGCTTGTGCTTCTACAGTGTCAGGTCAAACAGCCGAGTCTGAAGTACTT
AAAGCCCTGTCCCAGATTATCGATCCTGATTTTGGAACTGACATCGTCTCTTGTGGATTC
GTGAAGGACCTCTTGGTTGATGAGAGCTTAGGAGAGGTGTCATTCCGGTTAGAGCTTACA
ACACCAGCATGTCCGATCAAGGACATGTTTGAGCAGAAGGCAAACGAGGTGGTTGCTGCA
CTTCCTTGGGTTAAAAAGGTCAATGTGACAATGTCAGCCCAACCAGCAAAACCTATGTAT
GCCGGACAGCTTCCCGCCGGGCTACAAACAATCTCCAACATAATTGCTGTTTCTAGTTGC
AAGGGAGGGGTAGGTAAATCAACTGTAGCGGTCAACCTCGCTTACACTTTGGCTGATATG
GGTGCTAGAGTTGGTATATTTGATGCAGATGTATATGGTCCTAGTTTGCCAACAATGGTG
TCCCCAGAAAACCGGATACTTGAAATGAATGCAGAGAAAAGAACCATTATTCCAACTGAA
TACATGGGTGTTAAGTTGGTATCTTTTGGATTTGCTGGGCAAGGGCGTGCAATTATGCGA
GGTCCTATGGTCTCGGGAGTCATCAACCAACTTTTGACTACTACAGAATGGGGAGAATTG
GACTACCTTGTTATTGATATGCCCCCTGGAACTGGTGATATTCAACTTACTTTATGTCAG
GTTGTTCCTTTGACTGCTGCAGTTATAGTTACTACACCTCAAAAGCTAGCATTTATAGAT
GTAGCTAAGGGTGTCCGCATGTTCTCAAAGCTTAAGGTGCCTTGCGTTGCCGTAGTTGAG
AACATGTGCCACTTCGATGCTGATGGAAAACGTTACTACCCTTTCGGCAGGGGTTCAGGG
TCTCAGGTTGTCCAGCAGTTCGGAATCCCCCATCTATTTGATCTCCCTATCCAACCAACT
CTATCTGCTTCTGGAGATAGTGGAATGCCTGAAGTGGTGGCTGATCCTCAAGGTGAAGTT
TCCAGAACATTCCAAGAGCTAGGCGTGTGCGTAGTACAACAGTGTGCCAAGATTCGTCAA
CAAGTATCGACTGCAGTGAGTTATGATAGATCTATCAAGGCGATAAAGGTCAAAGTACCT
GATTCCGATGAAGAGTTTTATTTGCACCCTGCAACTGTAAGGAGAAATGATCGATCTGCC
CAAAGTGTGGATGAATGGACGGGTGAACAGAAACTGCAATATTCTGATATCCCAGACGAC
ATTGAACCTGAAGAGATCCGGCCTTTAGGAAACTATGCTGTGGAAATAACATGGCCAGAC
GGATTTAACCAGATAGCTCCTTATGACCAGCTGCAAATGATGGAGCGCTTGGTTGAAGTT
CCTCAACTTACTCCTGCATAG

Peptide Sequence

PEP ID

XP_016479991.1
PEP Infomation

PREDICTED: fe-S cluster assembly factor HCF101, chloroplastic-like [Nicotiana tabacum]
Sequence

MTQLLQAPSSPTLTFHHCTSQPKSGLYVAEKSFLQSTQRHVRSLNISYTYSSLSSFTAKA
ASNGACASTVSGQTAESEVLKALSQIIDPDFGTDIVSCGFVKDLLVDESLGEVSFRLELT
TPACPIKDMFEQKANEVVAALPWVKKVNVTMSAQPAKPMYAGQLPAGLQTISNIIAVSSC
KGGVGKSTVAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPENRILEMNAEKRTIIPTE
YMGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ
VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYPFGRGSG
SQVVQQFGIPHLFDLPIQPTLSASGDSGMPEVVADPQGEVSRTFQELGVCVVQQCAKIRQ
QVSTAVSYDRSIKAIKVKVPDSDEEFYLHPATVRRNDRSAQSVDEWTGEQKLQYSDIPDD
IEPEEIRPLGNYAVEITWPDGFNQIAPYDQLQMMERLVEVPQLTPA

Transcript Sequence

Gene sequence data has not been registered.